Table 7 Genotypes for polymorphisms in the clpP region (70,502–72,486 bp)
From: Massively parallel sequencing of Cannabis sativa chloroplast hotspots for forensic typing
Sample name | clpP hSTR1 (A) | clpP hSTR2 (Variable) | clpP hSTR3 (T) | clpP hSTR4 (T) | clpP INDEL (TTCAATTTA) |
|---|---|---|---|---|---|
Start location (bp) | 70,912 | 70,981 | 71,663 | 72,016 | 72,028 |
Yoruba Nigeria (NC_027223.1) | 11 | TATTT | 14 | 13 | Absent |
H2-4 | 11 | TATTT | 14 | 12 | Absent |
H3-3 | 11 | TATTT | 14 | 12 | Absent |
H5-4 | 10 | TTTT | 15 | 12 | Present |
NT H5-1 | 11 | TTTT | 14 | 12 | Absent |
NT H5-2 | 10 | TTTT | 15 | 11 | Present |
NT H5-4 | 11 | TTTT | 12 | 11 | Absent |
H8-1 | 10 | TTTT | 14 | 11 | Present |
10-A1 | 10 | TTTT | 15 | 11 | Present |
12-A7 | 10 | TTTT | 14 | 11 | Present |
16-B1 | 12 | TTTT | 11 | 10 | Absent |
21-A16 | 10 | TTTT | 15 | 11 | Present |
35 | 12 | TTTT | 11 | 10 | Absent |
41 | 12 | TTTT | 11 | 10 | Absent |
MedMJ10 | 10 | TTTT | 15 | 11 | Present |